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An Empirical Demonstration of Unsupervised Machine Learning in Species Delimitation
Research
Resources
biology
WS_2019
Tools
c++ notes
Sitemap
Resources
Useful resources for those starting computational projects in the solab!
Python
Google colab
Run python notebooks directly in your web-browser!
Alternatives:
Azure
by Microsoft
Jupyter
by mybinder.org
Anaconda
- install on your own computer
A Whirlwind Tour of Python
by J. VanderPlas
Introduction to Basic Python
Python Data Science Handbook
by J. VanderPlas
Introduction to Scientific libraries used in Python
Mathematics and Statistics
3Blue1Brown
- series of animated youtube videos
Essence of linear algebra
Essence of calculus
Neural Networks
Differential Equations
(new)
Advanced topics
The Elements of Statistical Learning
by T. Hastie, R. Tibshirani and J. Friedman
Neural networks
Deep Learning with Python
(not free, link to Amazon) by F. Chollet
BIG picture introduction to NN
Notebooks
to go with the book.
Advanced topics
Deep Learning
by I. Goodfellow, Y. Bengio and A. Courville
Reviews
Deep learning: new computational modelling techniques for genomics
Papers on machine learning for proteins
WORKSHOPS
Rosetta-Boston-Club-2019
- going from PSSM, MRF to VAE